Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
2210010C04RikQ9CPN9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
2210010C04RikQ9CPN9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
2210010C04RikQ9CPN9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
2210010C04RikQ9CPN9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
2210010C04RikQ9CPN9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
2210010C04RikQ9CPN9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
2210010C04RikQ9CPN9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
2210010C04RikQ9CPN9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
2210010C04RikQ9CPN9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
2210010C04RikQ9CPN9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms