Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim16Q99PP9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.03■□□□□ 0.16
Trim16Q99PP9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim16Q99PP9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim16Q99PP9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim16Q99PP9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.01■□□□□ 0.15
Trim16Q99PP9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.01■□□□□ 0.15
Trim16Q99PP9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim16Q99PP9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim16Q99PP9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms