Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.24■□□□□ 0.19
Trim33Q99PP7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim33Q99PP7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.24■□□□□ 0.19
Trim33Q99PP7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim33Q99PP7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim33Q99PP7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.22■□□□□ 0.19
Trim33Q99PP7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.22■□□□□ 0.19
Trim33Q99PP7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.22■□□□□ 0.19
Trim33Q99PP7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim33Q99PP7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim33Q99PP7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms