Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34aQ99PP6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm9172-201ENSMUST00000212092 954 ntBASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.15■□□□□ 0.82
Trim34aQ99PP6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Trim34aQ99PP6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Trim34aQ99PP6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim34aQ99PP6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trim34aQ99PP6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim34aQ99PP6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Gm8655-201ENSMUST00000221159 852 ntBASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim34aQ99PP6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim34aQ99PP6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Gm6089-201ENSMUST00000197666 938 ntBASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Psmb5-202ENSMUST00000227257 622 ntBASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim34aQ99PP6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.11■□□□□ 0.81
Trim34aQ99PP6 Gm11594-201ENSMUST00000122313 162 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms