Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col25a1Q99MQ5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col25a1Q99MQ5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Col25a1Q99MQ5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col25a1Q99MQ5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col25a1Q99MQ5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms