Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rnf111Q99ML9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf111Q99ML9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf111Q99ML9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Gm11539-201ENSMUST00000119837 557 ntBASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Gm13436-201ENSMUST00000120418 567 ntBASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf111Q99ML9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Gm27000-201ENSMUST00000182943 842 ntBASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf111Q99ML9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms