Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr3Q99MB1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.57■□□□□ 0.4
Tlr3Q99MB1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr3Q99MB1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr3Q99MB1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Gm27704-201ENSMUST00000185094 107 ntBASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Gm5587-201ENSMUST00000206270 674 ntBASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Tlr3Q99MB1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr3Q99MB1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms