Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm27646-201ENSMUST00000183989 110 ntBASIC20.17■□□□□ 0.82
RtcbQ99LF4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.17■□□□□ 0.82
RtcbQ99LF4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.16■□□□□ 0.82
RtcbQ99LF4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Gm18622-201ENSMUST00000219361 595 ntBASIC20.16■□□□□ 0.82
RtcbQ99LF4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RtcbQ99LF4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Gm5682-201ENSMUST00000173402 505 ntBASIC20.15■□□□□ 0.82
RtcbQ99LF4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RtcbQ99LF4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.14■□□□□ 0.82
RtcbQ99LF4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.14■□□□□ 0.81
RtcbQ99LF4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RtcbQ99LF4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.13■□□□□ 0.81
RtcbQ99LF4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RtcbQ99LF4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.12■□□□□ 0.81
RtcbQ99LF4 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.12■□□□□ 0.81
RtcbQ99LF4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.12■□□□□ 0.81
RtcbQ99LF4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.12■□□□□ 0.81
RtcbQ99LF4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RtcbQ99LF4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Mir6404-201ENSMUST00000183699 94 ntBASIC20.11■□□□□ 0.81
RtcbQ99LF4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.11■□□□□ 0.81
RtcbQ99LF4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms