Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcd2Q99JR8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Smarcd2Q99JR8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcd2Q99JR8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcd2Q99JR8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcd2Q99JR8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcd2Q99JR8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcd2Q99JR8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Gm12260-201ENSMUST00000122447 411 ntBASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcd2Q99JR8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Gm13036-201ENSMUST00000117799 748 ntBASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Gm14140-201ENSMUST00000119999 995 ntBASIC16.47■□□□□ 0.23
Smarcd2Q99JR8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms