Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.54■□□□□ 0.24
Cdk9Q99J95 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cdk9Q99J95 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.53■□□□□ 0.24
Cdk9Q99J95 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Trmt13-210ENSMUST00000198454 880 ntBASIC16.53■□□□□ 0.24
Cdk9Q99J95 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.53■□□□□ 0.24
Cdk9Q99J95 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdk9Q99J95 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Asic1-205ENSMUST00000228185 1818 ntBASIC16.52■□□□□ 0.24
Cdk9Q99J95 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdk9Q99J95 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cdk9Q99J95 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Gm11249-201ENSMUST00000117071 859 ntBASIC16.51■□□□□ 0.23
Cdk9Q99J95 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Gm4974-201ENSMUST00000209974 875 ntBASIC16.51■□□□□ 0.23
Cdk9Q99J95 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdk9Q99J95 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.5■□□□□ 0.23
Cdk9Q99J95 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Gm8520-201ENSMUST00000186517 868 ntBASIC16.5■□□□□ 0.23
Cdk9Q99J95 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.5■□□□□ 0.23
Cdk9Q99J95 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.5■□□□□ 0.23
Cdk9Q99J95 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.5■□□□□ 0.23
Cdk9Q99J95 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms