Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col20a1Q923P0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44357-201ENSMUST00000195897 142 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm19658-201ENSMUST00000196231 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44367-201ENSMUST00000196836 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44350-201ENSMUST00000197197 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44390-201ENSMUST00000197533 144 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44313-201ENSMUST00000198018 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44486-201ENSMUST00000198508 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44314-201ENSMUST00000199263 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44394-201ENSMUST00000199558 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44484-201ENSMUST00000199873 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44466-201ENSMUST00000200264 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm44359-201ENSMUST00000200671 138 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gm6296-201ENSMUST00000222599 943 ntBASIC19.28■□□□□ 0.68
Col20a1Q923P0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col20a1Q923P0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col20a1Q923P0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Gm6376-201ENSMUST00000209407 580 ntBASIC19.27■□□□□ 0.68
Col20a1Q923P0 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.27■□□□□ 0.68
Col20a1Q923P0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col20a1Q923P0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col20a1Q923P0 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.27■□□□□ 0.67
Col20a1Q923P0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col20a1Q923P0 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.26■□□□□ 0.67
Col20a1Q923P0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col20a1Q923P0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.26■□□□□ 0.67
Col20a1Q923P0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.26■□□□□ 0.67
Col20a1Q923P0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.26■□□□□ 0.67
Col20a1Q923P0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col20a1Q923P0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col20a1Q923P0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col20a1Q923P0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm7862-201ENSMUST00000121461 292 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm12497-201ENSMUST00000138778 237 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms