Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.83■□□□□ 0.6
Smc1bQ920F6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Rps4l-201ENSMUST00000071745 943 ntBASIC18.83■□□□□ 0.6
Smc1bQ920F6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smc1bQ920F6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smc1bQ920F6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc1bQ920F6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smc1bQ920F6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.81■□□□□ 0.6
Smc1bQ920F6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc1bQ920F6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.8■□□□□ 0.6
Smc1bQ920F6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.8■□□□□ 0.6
Smc1bQ920F6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smc1bQ920F6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.79■□□□□ 0.6
Smc1bQ920F6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smc1bQ920F6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms