Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha9Q91Y11 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha9Q91Y11 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Gm15794-201ENSMUST00000120182 631 ntBASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha9Q91Y11 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Gm27704-201ENSMUST00000185094 107 ntBASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha9Q91Y11 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha9Q91Y11 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms