Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gm10052-201ENSMUST00000168019 960 ntBASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gm7729-201ENSMUST00000050143 801 ntBASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb2Q91Y00 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Gm17807-201ENSMUST00000186869 298 ntBASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Gm10819-201ENSMUST00000099988 561 ntBASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb2Q91Y00 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Ank2-226ENSMUST00000189368 339 ntBASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb2Q91Y00 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb2Q91Y00 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb2Q91Y00 Mir3081-201ENSMUST00000175305 84 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms