Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga3Q91XY5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga3Q91XY5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhga3Q91XY5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhga3Q91XY5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhga3Q91XY5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Gm43799-201ENSMUST00000201845 579 ntBASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga3Q91XY5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Gm15565-201ENSMUST00000118890 427 ntBASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Gm7370-201ENSMUST00000219471 767 ntBASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga3Q91XY5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms