Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgc3Q91XX1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgc3Q91XX1 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgc3Q91XX1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgc3Q91XX1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgc3Q91XX1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms