Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Gm10478-201ENSMUST00000084451 396 ntBASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb17Q91VD8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Gm14776-201ENSMUST00000121029 887 ntBASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb17Q91VD8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm42651-201ENSMUST00000199851 1339 ntBASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm45166-201ENSMUST00000209073 683 ntBASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb17Q91VD8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms