Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Gm17808-201ENSMUST00000200859 894 ntBASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb11Q91UZ8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb11Q91UZ8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Gm11950-201ENSMUST00000121615 838 ntBASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb11Q91UZ8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb11Q91UZ8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb11Q91UZ8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms