Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp33Q8R5K2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Gm43575-201ENSMUST00000196420 516 ntBASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.8■□□□□ 0.6
Usp33Q8R5K2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp33Q8R5K2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp33Q8R5K2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp33Q8R5K2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Usp33Q8R5K2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Usp33Q8R5K2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp33Q8R5K2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp33Q8R5K2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp33Q8R5K2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp33Q8R5K2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp33Q8R5K2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms