Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh3kbp1Q8R550 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Gm13186-201ENSMUST00000118031 316 ntBASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Dancr-204ENSMUST00000132389 2347 ntBASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3kbp1Q8R550 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sh3kbp1Q8R550 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gm15794-201ENSMUST00000120182 631 ntBASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Phf7-203ENSMUST00000226565 1971 ntBASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3kbp1Q8R550 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3kbp1Q8R550 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sh3kbp1Q8R550 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sh3kbp1Q8R550 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms