Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Top1mtQ8R4U6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Top1mtQ8R4U6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Gm36967-201ENSMUST00000193814 266 ntBASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Top1mtQ8R4U6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Top1mtQ8R4U6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Top1mtQ8R4U6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Top1mtQ8R4U6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms