Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gm43183-201ENSMUST00000200632 547 ntBASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup35Q8R4R6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup35Q8R4R6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup35Q8R4R6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.39□□□□□ -0.27
Nup35Q8R4R6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup35Q8R4R6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gm27275-201ENSMUST00000184318 272 ntBASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nup35Q8R4R6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms