Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cacnb1Q8R3Z5 Phf7-203ENSMUST00000226565 1971 ntBASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 AC132433.1-201ENSMUST00000221553 1101 ntBASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacnb1Q8R3Z5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacnb1Q8R3Z5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm13836-201ENSMUST00000121159 501 ntBASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm9520-201ENSMUST00000209460 1253 ntBASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacnb1Q8R3Z5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Gm37469-201ENSMUST00000193728 890 ntBASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.48■□□□□ 0.55
Cacnb1Q8R3Z5 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms