Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Gm9987-201ENSMUST00000069768 567 ntBASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim29Q8R2Q0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trim29Q8R2Q0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim29Q8R2Q0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim29Q8R2Q0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim29Q8R2Q0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim29Q8R2Q0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms