Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ddx54Q8K4L0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Gm44335-201ENSMUST00000196879 141 ntBASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Gm44297-201ENSMUST00000198304 141 ntBASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Gm44346-201ENSMUST00000198851 141 ntBASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Gm5626-201ENSMUST00000222151 1058 ntBASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx54Q8K4L0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx54Q8K4L0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx54Q8K4L0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Arhgef33-209ENSMUST00000225223 714 ntBASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 CT025535.1-201ENSMUST00000227172 491 ntBASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx54Q8K4L0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx54Q8K4L0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx54Q8K4L0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx54Q8K4L0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Gm13365-201ENSMUST00000121188 973 ntBASIC21.32■■□□□ 1
Ddx54Q8K4L0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.32■■□□□ 1
Ddx54Q8K4L0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx54Q8K4L0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms