Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.32□□□□□ -0.76
Cystm1Q8K353 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cystm1Q8K353 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.31□□□□□ -0.76
Cystm1Q8K353 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cystm1Q8K353 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Cystm1Q8K353 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.3□□□□□ -0.76
Cystm1Q8K353 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.3□□□□□ -0.76
Cystm1Q8K353 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.3□□□□□ -0.76
Cystm1Q8K353 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cystm1Q8K353 Flg-201ENSMUST00000050758 1488 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms