Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Trim52Q8CDV4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim52Q8CDV4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim52Q8CDV4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trim52Q8CDV4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.14■□□□□ 0.81
Trim52Q8CDV4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Psmb5-202ENSMUST00000227257 622 ntBASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.14■□□□□ 0.81
Trim52Q8CDV4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim52Q8CDV4 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.12■□□□□ 0.81
Trim52Q8CDV4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Gm18622-201ENSMUST00000219361 595 ntBASIC20.12■□□□□ 0.81
Trim52Q8CDV4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Gm15590-201ENSMUST00000078419 552 ntBASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim52Q8CDV4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.11■□□□□ 0.81
Trim52Q8CDV4 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim52Q8CDV4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Gm13036-201ENSMUST00000117799 748 ntBASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Gm11779-201ENSMUST00000118541 368 ntBASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim52Q8CDV4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms