Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Vcpip1Q8CDG3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcpip1Q8CDG3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vcpip1Q8CDG3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Vcpip1Q8CDG3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Gm7370-201ENSMUST00000219471 767 ntBASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcpip1Q8CDG3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms