Protein–RNA interactions for Protein: Q8CBM3

Gm16223, MCG145574 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm16223Q8CBM3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm16223Q8CBM3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm16223Q8CBM3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm16223Q8CBM3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Gm16223Q8CBM3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Gm16223Q8CBM3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm12382-201ENSMUST00000122005 922 ntBASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm16223Q8CBM3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 App-207ENSMUST00000227737 2827 ntBASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm37025-201ENSMUST00000195159 829 ntBASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm16223Q8CBM3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm16223Q8CBM3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms