Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.67■□□□□ 0.26
Rfx6Q8C7R7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx6Q8C7R7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx6Q8C7R7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rfx6Q8C7R7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rfx6Q8C7R7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx6Q8C7R7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms