Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim9Q8C7M3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trim9Q8C7M3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Trim9Q8C7M3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.08■□□□□ 0.48
Trim9Q8C7M3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.07■□□□□ 0.48
Trim9Q8C7M3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim9Q8C7M3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim9Q8C7M3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Mir770-201ENSMUST00000103252 94 ntBASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Gm9013-201ENSMUST00000132939 882 ntBASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim9Q8C7M3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms