Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Gm25016-201ENSMUST00000158399 131 ntBASIC15.57■□□□□ 0.08
Eri3Q8C460 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.57■□□□□ 0.08
Eri3Q8C460 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Eri3Q8C460 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Eri3Q8C460 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.56■□□□□ 0.08
Eri3Q8C460 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Gm6623-201ENSMUST00000173570 544 ntBASIC15.56■□□□□ 0.08
Eri3Q8C460 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.56■□□□□ 0.08
Eri3Q8C460 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Eri3Q8C460 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Eri3Q8C460 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Eri3Q8C460 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.55■□□□□ 0.08
Eri3Q8C460 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Eri3Q8C460 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Eri3Q8C460 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.54■□□□□ 0.08
Eri3Q8C460 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.54■□□□□ 0.08
Eri3Q8C460 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Eri3Q8C460 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Eri3Q8C460 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Eri3Q8C460 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Eri3Q8C460 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Eri3Q8C460 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms