Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Gm36967-201ENSMUST00000193814 266 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf2Q8BZT2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm6376-201ENSMUST00000209407 580 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf2Q8BZT2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.53■□□□□ 0.24
Sh3rf2Q8BZT2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms