Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Cdk5rap1Q8BTW8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdk5rap1Q8BTW8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm27459-201ENSMUST00000184860 107 ntBASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdk5rap1Q8BTW8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm44454-201ENSMUST00000198541 138 ntBASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdk5rap1Q8BTW8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm15165-201ENSMUST00000118140 502 ntBASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdk5rap1Q8BTW8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms