Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Cpne3Q8BT60 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Gm5417-201ENSMUST00000079706 384 ntBASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne3Q8BT60 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne3Q8BT60 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.81■□□□□ 0.12
Cpne3Q8BT60 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne3Q8BT60 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne3Q8BT60 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms