Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Suds3Q8BR65 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.84■□□□□ 0.29
Suds3Q8BR65 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Suds3Q8BR65 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Suds3Q8BR65 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Suds3Q8BR65 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Suds3Q8BR65 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.83■□□□□ 0.28
Suds3Q8BR65 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Suds3Q8BR65 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Suds3Q8BR65 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.81■□□□□ 0.28
Suds3Q8BR65 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Gm18958-201ENSMUST00000174258 762 ntBASIC16.81■□□□□ 0.28
Suds3Q8BR65 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.81■□□□□ 0.28
Suds3Q8BR65 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Suds3Q8BR65 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Gm22697-201ENSMUST00000175194 63 ntBASIC16.8■□□□□ 0.28
Suds3Q8BR65 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Suds3Q8BR65 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Gm18101-201ENSMUST00000215769 548 ntBASIC16.79■□□□□ 0.28
Suds3Q8BR65 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Suds3Q8BR65 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms