Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc40Q8BI79 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc40Q8BI79 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc40Q8BI79 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc40Q8BI79 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc40Q8BI79 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Gm11539-201ENSMUST00000119837 557 ntBASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Gm13436-201ENSMUST00000120418 567 ntBASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc40Q8BI79 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms