Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trnp1Q80ZI1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
Trnp1Q80ZI1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm8825-201ENSMUST00000182565 998 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm4518-201ENSMUST00000182638 718 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm37153-201ENSMUST00000193637 231 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnp1Q80ZI1 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Gm4899-201ENSMUST00000178708 719 ntBASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trnp1Q80ZI1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Mir6956-201ENSMUST00000183598 62 ntBASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gm5186-201ENSMUST00000218781 920 ntBASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnp1Q80ZI1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnp1Q80ZI1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms