Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.6■□□□□ 0.09
Vrk1Q80X41 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vrk1Q80X41 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.59■□□□□ 0.09
Vrk1Q80X41 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.59■□□□□ 0.09
Vrk1Q80X41 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gm2651-201ENSMUST00000203560 838 ntBASIC15.59■□□□□ 0.09
Vrk1Q80X41 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Gm6296-201ENSMUST00000222599 943 ntBASIC15.59■□□□□ 0.09
Vrk1Q80X41 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vrk1Q80X41 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vrk1Q80X41 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gm7862-201ENSMUST00000121461 292 ntBASIC15.58■□□□□ 0.08
Vrk1Q80X41 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.58■□□□□ 0.08
Vrk1Q80X41 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vrk1Q80X41 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Gm18206-201ENSMUST00000207027 926 ntBASIC15.57■□□□□ 0.08
Vrk1Q80X41 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Gm5867-201ENSMUST00000063197 592 ntBASIC15.57■□□□□ 0.08
Vrk1Q80X41 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vrk1Q80X41 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.56■□□□□ 0.08
Vrk1Q80X41 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms