Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim36Q80WG7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.83■□□□□ 0.12
Trim36Q80WG7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim36Q80WG7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Gm38027-201ENSMUST00000192315 235 ntBASIC15.82■□□□□ 0.12
Trim36Q80WG7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim36Q80WG7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim36Q80WG7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.81■□□□□ 0.12
Trim36Q80WG7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim36Q80WG7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.8■□□□□ 0.12
Trim36Q80WG7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim36Q80WG7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.79■□□□□ 0.12
Trim36Q80WG7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.79■□□□□ 0.12
Trim36Q80WG7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim36Q80WG7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms