Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf40bQ80W14 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Gm11779-201ENSMUST00000118541 368 ntBASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Gm12350-201ENSMUST00000121208 462 ntBASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf40bQ80W14 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf40bQ80W14 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Gm13216-201ENSMUST00000117145 591 ntBASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf40bQ80W14 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Gm10060-201ENSMUST00000212002 111 ntBASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf40bQ80W14 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf40bQ80W14 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms