Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otop1Q80VM9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Otop1Q80VM9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.68■□□□□ 0.1
Otop1Q80VM9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.68■□□□□ 0.1
Otop1Q80VM9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otop1Q80VM9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.67■□□□□ 0.1
Otop1Q80VM9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otop1Q80VM9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otop1Q80VM9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms