Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sned1Q70E20 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Gm15358-201ENSMUST00000119249 520 ntBASIC19.69■□□□□ 0.74
Sned1Q70E20 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.69■□□□□ 0.74
Sned1Q70E20 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.69■□□□□ 0.74
Sned1Q70E20 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.69■□□□□ 0.74
Sned1Q70E20 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sned1Q70E20 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sned1Q70E20 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm18489-201ENSMUST00000172565 551 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm43125-201ENSMUST00000201724 730 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm7787-201ENSMUST00000216858 688 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.68■□□□□ 0.74
Sned1Q70E20 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sned1Q70E20 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sned1Q70E20 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Sned1Q70E20 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Gm12428-201ENSMUST00000119844 727 ntBASIC19.67■□□□□ 0.74
Sned1Q70E20 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.67■□□□□ 0.74
Sned1Q70E20 Gm18889-201ENSMUST00000174284 929 ntBASIC19.67■□□□□ 0.74
Sned1Q70E20 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.67■□□□□ 0.74
Sned1Q70E20 Gm8969-201ENSMUST00000199694 526 ntBASIC19.67■□□□□ 0.74
Sned1Q70E20 Gm20553-201ENSMUST00000204205 844 ntBASIC19.67■□□□□ 0.74
Sned1Q70E20 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sned1Q70E20 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.66■□□□□ 0.74
Sned1Q70E20 Gm27301-201ENSMUST00000184012 127 ntBASIC19.66■□□□□ 0.74
Sned1Q70E20 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sned1Q70E20 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.66■□□□□ 0.74
Sned1Q70E20 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.65■□□□□ 0.74
Sned1Q70E20 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.65■□□□□ 0.74
Sned1Q70E20 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
Sned1Q70E20 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms