Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn10aQ6QIY3 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.46■□□□□ 0.54
Scn10aQ6QIY3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Mir1895-201ENSMUST00000122615 79 ntBASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn10aQ6QIY3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Gm15358-201ENSMUST00000119249 520 ntBASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn10aQ6QIY3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Gm44335-201ENSMUST00000196879 141 ntBASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Gm44297-201ENSMUST00000198304 141 ntBASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Gm44346-201ENSMUST00000198851 141 ntBASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Scn10aQ6QIY3 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn10aQ6QIY3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms