Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp50Q6P8X6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp50Q6P8X6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Birc2-201ENSMUST00000054878 378 ntBASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Gm7461-201ENSMUST00000058918 827 ntBASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp50Q6P8X6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp50Q6P8X6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp50Q6P8X6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Gm15372-201ENSMUST00000120729 834 ntBASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Gm27459-201ENSMUST00000184860 107 ntBASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp50Q6P8X6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Usp50Q6P8X6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp50Q6P8X6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp50Q6P8X6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms