Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac4Q6NZM9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac4Q6NZM9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac4Q6NZM9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac4Q6NZM9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac4Q6NZM9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hdac4Q6NZM9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hdac4Q6NZM9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hdac4Q6NZM9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hdac4Q6NZM9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms