Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col7a1Q63870 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col7a1Q63870 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.53□□□□□ -0.24
Col7a1Q63870 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col7a1Q63870 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col7a1Q63870 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.52□□□□□ -0.24
Col7a1Q63870 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.52□□□□□ -0.24
Col7a1Q63870 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col7a1Q63870 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col7a1Q63870 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.52□□□□□ -0.25
Col7a1Q63870 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col7a1Q63870 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col7a1Q63870 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 Gm24158-201ENSMUST00000175263 71 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 Gm44855-201ENSMUST00000205725 362 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 Thap2-203ENSMUST00000218989 527 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Col7a1Q63870 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.51□□□□□ -0.25
Col7a1Q63870 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.51□□□□□ -0.25
Col7a1Q63870 Rpph1-201ENSMUST00000175096 319 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.51□□□□□ -0.25
Col7a1Q63870 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col7a1Q63870 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Mir1938-201ENSMUST00000158746 100 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 Mir8102-201ENSMUST00000184148 139 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Gm7774-201ENSMUST00000200064 533 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col7a1Q63870 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Mir3547-201ENSMUST00000175461 88 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.5□□□□□ -0.25
Col7a1Q63870 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.5□□□□□ -0.25
Col7a1Q63870 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col7a1Q63870 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.5□□□□□ -0.25
Col7a1Q63870 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.5□□□□□ -0.25
Col7a1Q63870 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col7a1Q63870 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col7a1Q63870 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col7a1Q63870 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col7a1Q63870 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col7a1Q63870 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col7a1Q63870 Gm27989-201ENSMUST00000184721 107 ntBASIC13.49□□□□□ -0.25
Col7a1Q63870 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms