Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Gm11336-201ENSMUST00000118168 334 ntBASIC16.81■□□□□ 0.28
Six1Q62231 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Gm29707-201ENSMUST00000196325 491 ntBASIC16.81■□□□□ 0.28
Six1Q62231 Gm7213-201ENSMUST00000215977 950 ntBASIC16.81■□□□□ 0.28
Six1Q62231 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Six1Q62231 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six1Q62231 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.8■□□□□ 0.28
Six1Q62231 Gm13436-201ENSMUST00000120418 567 ntBASIC16.8■□□□□ 0.28
Six1Q62231 Gm16061-201ENSMUST00000122167 857 ntBASIC16.8■□□□□ 0.28
Six1Q62231 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Six1Q62231 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.8■□□□□ 0.28
Six1Q62231 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Six1Q62231 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six1Q62231 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.8■□□□□ 0.28
Six1Q62231 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.79■□□□□ 0.28
Six1Q62231 Gm30025-201ENSMUST00000218555 728 ntBASIC16.79■□□□□ 0.28
Six1Q62231 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Six1Q62231 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Six1Q62231 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six1Q62231 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.79■□□□□ 0.28
Six1Q62231 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Six1Q62231 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Six1Q62231 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Six1Q62231 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Gm2274-201ENSMUST00000184539 609 ntBASIC16.78■□□□□ 0.28
Six1Q62231 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Six1Q62231 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Six1Q62231 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six1Q62231 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.78■□□□□ 0.28
Six1Q62231 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Six1Q62231 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.77■□□□□ 0.28
Six1Q62231 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six1Q62231 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Six1Q62231 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six1Q62231 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six1Q62231 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six1Q62231 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Six1Q62231 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms