Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.38■□□□□ 0.53
Sycp1Q62209 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sycp1Q62209 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.38■□□□□ 0.53
Sycp1Q62209 Gm27389-201ENSMUST00000183622 195 ntBASIC18.38■□□□□ 0.53
Sycp1Q62209 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Sycp1Q62209 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.38■□□□□ 0.53
Sycp1Q62209 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Sycp1Q62209 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sycp1Q62209 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sycp1Q62209 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Phf7-203ENSMUST00000226565 1971 ntBASIC18.37■□□□□ 0.53
Sycp1Q62209 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm18032-201ENSMUST00000222541 538 ntBASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sycp1Q62209 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sycp1Q62209 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Sycp1Q62209 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.36■□□□□ 0.53
Sycp1Q62209 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Gm26039-201ENSMUST00000158152 144 ntBASIC18.36■□□□□ 0.53
Sycp1Q62209 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sycp1Q62209 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.36■□□□□ 0.53
Sycp1Q62209 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sycp1Q62209 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Gm21559-201ENSMUST00000220638 855 ntBASIC18.35■□□□□ 0.53
Sycp1Q62209 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Gm8587-201ENSMUST00000076538 843 ntBASIC18.35■□□□□ 0.53
Sycp1Q62209 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.35■□□□□ 0.53
Sycp1Q62209 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
Sycp1Q62209 Haglr-201ENSMUST00000100000 2085 ntBASIC18.35■□□□□ 0.53
Sycp1Q62209 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sycp1Q62209 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sycp1Q62209 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sycp1Q62209 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sycp1Q62209 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sycp1Q62209 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sycp1Q62209 Gm10013-201ENSMUST00000106074 672 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms