Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Gm13597-201ENSMUST00000121239 375 ntBASIC15.32■□□□□ 0.04
VcanQ62059 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
VcanQ62059 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.31■□□□□ 0.04
VcanQ62059 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Gm12497-201ENSMUST00000138778 237 ntBASIC15.31■□□□□ 0.04
VcanQ62059 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.31■□□□□ 0.04
VcanQ62059 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
VcanQ62059 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Gm4459-201ENSMUST00000118750 468 ntBASIC15.31■□□□□ 0.04
VcanQ62059 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VcanQ62059 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VcanQ62059 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VcanQ62059 Gm22175-201ENSMUST00000175007 78 ntBASIC15.3■□□□□ 0.04
VcanQ62059 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.3■□□□□ 0.04
VcanQ62059 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.3■□□□□ 0.04
VcanQ62059 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.3■□□□□ 0.04
VcanQ62059 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.3■□□□□ 0.04
VcanQ62059 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.3■□□□□ 0.04
VcanQ62059 Gm25948-201ENSMUST00000175334 112 ntBASIC15.3■□□□□ 0.04
VcanQ62059 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VcanQ62059 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VcanQ62059 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VcanQ62059 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.3■□□□□ 0.04
VcanQ62059 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Gm6912-201ENSMUST00000117218 544 ntBASIC15.3■□□□□ 0.04
VcanQ62059 Gm8825-201ENSMUST00000182565 998 ntBASIC15.3■□□□□ 0.04
VcanQ62059 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.3■□□□□ 0.04
VcanQ62059 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.3■□□□□ 0.04
VcanQ62059 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VcanQ62059 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.29■□□□□ 0.04
VcanQ62059 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VcanQ62059 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.29■□□□□ 0.04
VcanQ62059 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VcanQ62059 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Mir8112-201ENSMUST00000184382 131 ntBASIC15.28■□□□□ 0.04
VcanQ62059 Gm43630-201ENSMUST00000201550 776 ntBASIC15.28■□□□□ 0.04
VcanQ62059 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VcanQ62059 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.28■□□□□ 0.04
VcanQ62059 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.28■□□□□ 0.04
VcanQ62059 Gm45612-201ENSMUST00000211320 160 ntBASIC15.28■□□□□ 0.04
VcanQ62059 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VcanQ62059 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.28■□□□□ 0.04
VcanQ62059 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
VcanQ62059 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.28■□□□□ 0.04
VcanQ62059 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VcanQ62059 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.28■□□□□ 0.04
VcanQ62059 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VcanQ62059 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VcanQ62059 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.27■□□□□ 0.04
VcanQ62059 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.27■□□□□ 0.04
VcanQ62059 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VcanQ62059 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VcanQ62059 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VcanQ62059 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VcanQ62059 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms